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中国精品科技期刊2020
冼芳莹,赵文鹏,王思宇,等. 基于宏基因组测序技术解析高温快速发酵豆豉菌群结构与功能注释[J]. 食品工业科技,2023,44(2):159−169. doi: 10.13386/j.issn1002-0306.2022030348.
引用本文: 冼芳莹,赵文鹏,王思宇,等. 基于宏基因组测序技术解析高温快速发酵豆豉菌群结构与功能注释[J]. 食品工业科技,2023,44(2):159−169. doi: 10.13386/j.issn1002-0306.2022030348.
XIAN Fangying, ZHAO Wenpeng, WANG Siyu, et al. Analysis of the Structure and Function of High Temperature and Rapid Fermentation Douchi Flora Based on Macrogenome Sequencing Technology[J]. Science and Technology of Food Industry, 2023, 44(2): 159−169. (in Chinese with English abstract). doi: 10.13386/j.issn1002-0306.2022030348.
Citation: XIAN Fangying, ZHAO Wenpeng, WANG Siyu, et al. Analysis of the Structure and Function of High Temperature and Rapid Fermentation Douchi Flora Based on Macrogenome Sequencing Technology[J]. Science and Technology of Food Industry, 2023, 44(2): 159−169. (in Chinese with English abstract). doi: 10.13386/j.issn1002-0306.2022030348.

基于宏基因组测序技术解析高温快速发酵豆豉菌群结构与功能注释

Analysis of the Structure and Function of High Temperature and Rapid Fermentation Douchi Flora Based on Macrogenome Sequencing Technology

  • 摘要: 为揭示高温快速发酵曲霉型豆豉菌群结构在发酵过程中的变化规律,分析不同发酵阶段菌群的基因功能分布及贡献度之间的差异,基于宏基因组学手段对高温快速发酵豆豉中菌群和功能多样性进行解析,从而揭示菌群结构变化与代谢功能分布规律。菌群结构多样性结果显示,经高温发酵的豆豉中98.9%~99.8%为细菌。发酵前期,魏斯氏菌(Weissella)、乳杆菌(Lactobacillus)、片球菌(Pediococcus)及肠球菌(Enterococcus)4个优势菌属均为乳酸菌,占比总和高达69.91%,而中后期则以拟杆菌属(Bacteroides)、普氏菌属(Prevotella)、肠球菌属等专性厌氧菌属为主;KEGG结果显示,与代谢相关基因占比超过50%,表明发酵过程代谢旺盛,其中碳水化合物代谢和氨基酸代谢为主要代谢通路;CAZy结果显示,糖苷水解酶和糖苷转移酶基因丰度最高,表明发酵过程中糖苷转移活跃,产生丰富的寡糖与单糖供菌群代谢利用。以上研究可为豆豉多菌混合发酵工艺的改进提供新视角,也为后续运用多组学技术探索豆豉微生物与功能风味物质形成的内在机制奠定基础。

     

    Abstract: To reveal the change rule of the microbiota structure of high-temperature fast-fermented Aspergillus-type Douchi during the fermentation process, and to analyze the difference between the distribution of functional gene and its contribution in different fermentation stages. The diversity of the microbiota and its function in high-temperature fast-fermentation Douchi was analyzed based on metagenomics methods, so as to reveal the changes in the microbiota structure and the distribution of metabolic functions. The results of microbiota structure diversity showed that the bacteria occupied the 98.9%~99.8% of organisms in fermented Douchi. In the early stage of fermentation, the four dominant genera Weissella, Lactobacillus, Pediococcus and Enterococcus were all lactic acid bacteria, which accounting for 69.91% of the microbiota. In the middle and late stages, obligate anaerobic bacteria such as Bacteroide, Prevotella, and Enterococcus were dominant genera. The KEGG results showed that genes related to metabolism accounted for more than 50%, indicating that the fermentation process was vigorous in metabolism, of which carbohydrate metabolism and amino acid metabolism were the main metabolic pathways. The CAZy results showed that the gene abundance of glycoside hydrolase and glycosyltransferase was the highest, indicating that the glycoside transfer was active during the fermentation process, where the abundant oligosaccharides and monosaccharides were produced for the metabolic utilization of microbial community. The above research can provide a new insight for the improvement of the multi-bacteria mixed fermentation process of Douchi, and also lay a foundation for the subsequent application of multi-omics technology to explore the internal mechanism of the formation of microorganisms and functional flavor substances in Douchi.

     

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