草酸诱导哈密瓜采后耐冷性的转录组构建与分析
Transcriptome Construction and Analysis of Cold-resistant Induced by Oxalic Acid in Postharvest Hami Melon Fruit
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摘要: 为了研究草酸诱导低温冷藏哈密瓜果实耐冷性的机理。以"西州蜜25号"哈密瓜果实为试材,对照组为清水浸泡,处理组为15 mmol/L草酸溶液浸泡,时间均为10 min,通过测定果皮的细胞膜滲透率和丙二醛(MDA)含量,及对采收当天(设为原始点:YSD)、3℃低温贮藏第42 d冷害比较严重的对照(C)和草酸处理(T)哈密瓜果皮进行转录组测序。结果显示,草酸处理降低细胞膜渗透率和MDA含量,缓解果实采后冷害的发生。9个样本经转录组测序后共获得了418943882个过滤序列。对过滤序列进行拼接,获得252169个重叠片段,进一步组装获得153128个基因片段,其中有71.28%的基因比对到NR数据库中。注释到NR数据库中的基因有56%匹配到已发表甜瓜基因组序列,并有33346(21.8%)个基因在KEGG中成功获得注释,其中代谢通路中的碳水化合物代谢基因数目较多。表明哈密瓜在低温冷藏过程中草酸调控低温胁迫主要富集在碳水化合物代谢通路上。Abstract: The mechanism of cold tolerance of Hami melon fruit induced by OA treatment was studied. ‘Xizhoumi No. 25’ Hami melon fruit was used as the material,the control group were socked in clear water and the treatment group was soaked in 15 mmol/L OA solution for 10 min respectively. The variation of the electrolyte leakage and the MDA concentration were measured,and transcriptome sequencing was conducted on the pericarp of Hami melon fruit on the day of harvest(Yuanshidian:YSD),and from OA treated(T)and untreated(C)fruit after storage at 3℃ for 42 days. The results showed that OA treatment decreased the electrolyte leakage and the MDA concentration,and relieved the occurrence of chilling injury after harvest. A total of 418943882 clean reads were obtained,which were spliced and 252169 contig fragments were obtained,and 153128 unigene fragments were further assembled,71.28% percent of unigenes were annotated in NR database and of which 56% unigenes matched to the published melon genome sequence. 33346(21.8%)unigenes in KEGG were successful annotation,the number of genes in the metabolic pathway was greater. The regulations of cold stress by OA treatment in Hami melon fruit during cold storage were mainly concentrated in the carbohydrate metabolism pathway.